Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851800.1_cds_XP_016511612.1_24335
CDS Infomation

[gene=LOC107828758] [db_xref=GeneID:107828758] [protein=sporulation protein RMD1-like] [protein_id=XP_016511612.1] [location=join(60784..61256,61338..61449,63915..64074,65388..65536,65623..65774,66711..66825,67383..67520)] [gbkey=CDS]
Sequence

ATGTTGAGGACTGTGTGGAGACCCAATAACGCTGCTCCAATGAAGTCTGTCACTGCTATT
TCTTCCTCCATTCCTTCTCTTAACAAAGCTTTCCGAACTCTCTTCACTCTCTCCTCCGCC
ACAACAAATCCTACTGCTCTCCACGTTCTCCCAGGCCTAACCCTACAGAACTCTCCGCTA
TGCCGTCGGCCGATTACTCTCACTTTCTCAGTCATTCTCCGTCGCCAATCGCATTCTGTT
GTGAACCACGGCTTCATTTCCTCTCGTAAGAAGCCTAACTTCGCCGTCGTCAAATGCATC
TCTTCTATATCCTCATCGGCGCACACTGTGGACTGGAACGACGCCGTTTCGTGCTCGGAG
ATTGGGCTGAGTGAAGCTGAAGAATTGGCTTTGGAGCAGGAAGAGGATGATGATGCTAGT
GCTACTGCTATTAAGCCATATGTCCCCGTTAGGGCTTTCTTTTTCTCTACTAGTGTGGAT
TTGAGGAGCTTAGTGGAAAAGAACAAGCAGAATTTTATTCCACCGACTTCTCGAATGACC
AATTATGTTGTTTTAAGATTTGGGGACACCAAGAAGGCACCTAGTGCTTTAGGTGCTAAC
TTAAGTGGCAGTGACTGCTGTTACATGGTAGTTTTCCAGTATGGCTCGATTGTCTTGTTT
AATGTCTCTGATCACGAGGTTGATGGGTACCTGAAGATTGTCGAGAGACACGCTTCGGGG
TTATTACCGGAGATGAGAAAGGATGAATATGAGGTGAGAGAGAAGCCAACTTTGACCACG
TGGATGCAAGGTGGATTAGACTACATAATGTTGCAGTATATGAATATTGACGGTATCCGA
ACCATTGGCAGTGTTCTTGGTCAAAGTATTGCTCTTGATTACTATGTCCGCCAAGTTGAC
GGAATGGTTGCTGAGTTTACAGACATCAATCGTGGAATGGAAAAGACTGGAACTTTCACT
ATGGAGAGGAAAAAGCTTTTCCAACTGGTTGGCAAGGCAAATTCTAATCTTGCTGATGTT
ATTCTTAAGCTAGGACTTTTTGAAAGATCGGATATCGCATGGAAGGATGCGAAATATGCT
CAAATTTGGGAATATCTTAGAGATGAATTTGAGTTGACTCAAAGATTCGCGAGCCTTGAT
TTTAAGTTGAAGTTTGTGGAGCATAATATACGATTCCTTCAAGAAATTCTTCAGAATAGG
AAGTCAGATTTCCTCGAGTGGCTCATTATTATATTGATAGGTGCAGAGATCCTCATTTCG
GTTTATGACATTGCCCACAAGTCGTCTATCGCGCTGTAG

Peptide Sequence

PEP ID

XP_016511612.1
PEP Infomation

PREDICTED: sporulation protein RMD1-like [Nicotiana tabacum]
Sequence

MLRTVWRPNNAAPMKSVTAISSSIPSLNKAFRTLFTLSSATTNPTALHVLPGLTLQNSPL
CRRPITLTFSVILRRQSHSVVNHGFISSRKKPNFAVVKCISSISSSAHTVDWNDAVSCSE
IGLSEAEELALEQEEDDDASATAIKPYVPVRAFFFSTSVDLRSLVEKNKQNFIPPTSRMT
NYVVLRFGDTKKAPSALGANLSGSDCCYMVVFQYGSIVLFNVSDHEVDGYLKIVERHASG
LLPEMRKDEYEVREKPTLTTWMQGGLDYIMLQYMNIDGIRTIGSVLGQSIALDYYVRQVD
GMVAEFTDINRGMEKTGTFTMERKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYA
QIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILIGAEILIS
VYDIAHKSSIAL

Transcript Sequence

Gene sequence data has not been registered.